Add subsystems or update their data — addSubsystem • cobrar

The function allows you to add one or more subsystems to a model. When providing the ID of an already existing subsystem, you can use this function to update the subsystem's name.

Usage

addSubsystem(model, id, name = NA)

Arguments

model: Model of class ModelOrg
id: Character vector with subsystem IDs
name: Character vector for subsystem names

Examples

fpath <- system.file("extdata", "e_coli_core.xml", package="cobrar")
mod <- readSBMLmod(fpath)
mod <- addSubsystem(mod, id = "Bifidoshunt",
                    name = "glucose fermentation to acetate and lactate (Bifidobacteria)")